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download.php from eXtensible Genome Data Broker at Krugle


Show download.php syntax highlighted

<?php
if(empty($SITEDEF_H)){require('SITEDEF.php');}
if(empty($PARAM_H)){require('getPARAM.php');}
require('SSI_GDBprep.php');
virtual("${CGIPATH}SSI_GDBgui.pl/TWO_COLUMN_HEADER/" . $SSI_QUERYSTRING);
?>

<div ID="mainWLS" align="center">
<H2>Downloads</H2>
<P align='left'>
<?php echo $SITENAMEshort; ?> encompasses primary sequence data obtained from GenBank, including the most current
gss and BAC assembly and annotation, EST and cDNA sequences, and protein sequences derived from
the annotated genes.
<?php echo $LATINORGN; ?> genome assemblies refer to the pseudo-chromosome tiling of individual genomic sequence 
fragments obtained from the listed assembly sources.
The mapping of cDNA and EST sequences onto the genome as well as interpretations of the overall
data are based on our own spliced alignment results.
</P>

<P align='left'>
The <?php echo $COMMONORGN2; ?> genome assembly is still being refined and completed.
<?php echo $SITENAMEshort; ?> attempts to remain synchronized with the most recent release of the
genome assembly and annotations.
</P>
<H3>!! Useful downloads to appear here soon !!</H3>
</div>

<?php
require('SSI_GDBprep.php');
virtual("${CGIPATH}SSI_GDBgui.pl/STANDARD_FOOTER/" . $SSI_QUERYSTRING);
?>




See more files for this project here

eXtensible Genome Data Broker

The xGDB project provides scientists with an online portal for the integration of diverse sources of genomic data. Portals allow researchers to effectively target a specific scientific question by customizing their interactions with available data.

Project homepage: http://sourceforge.net/projects/xgdb
Programming language(s): JavaScript,Perl,PHP
License: other

  Annotation/
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        CDNA.png
        EST.png
        GBK.png
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        description.html
        ruler.png
      04mar11/
        CDNA.png
        EST.png
        GBK.png
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        description.html
        ruler.png
      GeneModelMerge/
        CDNA.png
        EST.png
        GBK.png
        UCA.png
        index.php
        ruler.png
      GeneModelSplit/
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        EST.png
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        index.php
        ruler.png
    gaeval/
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        altspl.png
        amb3.png
        amb5.png
        att.png
        cov0.png
        cov1.png
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        fission.png
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      GLquery.css
      GLquery.js
      cps.php
      fig1.png
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      figa.png
      gaeval_lists.php
      index.php
    ATchr2.aln
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    UCAlist.php
    index.php
    vector.php
  Interns/
    spring2004/
      Anna_pic.jpg
      DNA Re1.gif
      DNA Re2.gif
      Exampl3.gif
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      Exampl5.gif
      Exampl6.gif
      Exampl7.gif
      Main P1.jpg
      Xin_pic.jpg
      expression.gif
      index.php
      replication.jpg
      transcription.gif
      transcription_mov.gif
      watson.gif
    index.php
  prj/
    BMBR03/
      IMM/
      VAR2/
      greenwhite_paper.gif
      help.html
      index.html
      list
      sm.png
    BXZ03B/
      AraSet/
      OsBAC/
      atac/
      img/
      index.php
      xc
    RHMB05PP/
      figure_S1.jpg
      figure_S1.php
      index.php
      method.php
      table_S1.php
      table_S2.php
      table_S3.php
      table_S4.php
    TBWB04/
      PLC/
      AtOs-Human-PLC-NJtree.pdf
      AtOs-Human-PLC-distances.txt
      AtOs-Human-PLC.aln
      AtOs-Human-PLC.fas
      Plant-Human-PLC-Matching-NJtree.pdf
      Plant-Human-PLC-Matching-distances.txt
      Plant-Human-PLC-Matching.aln
      Plant-Human-PLC-Matching.fas
      Plant-Human-PLC-NJtree.pdf
      Plant-Human-PLC-distances.txt
      Plant-Human-PLC.aln
      Plant-Human-PLC.fas
      index.php
      plc.png
    ZB03NAR/
      U12.php
      U12.png
      U12_at_ax_acc_new.gif
      U12_at_ax_branch_new.gif
      U12_at_ax_donor_new.gif
      U12_gt_ag_acc_new.gif
      U12_gt_ag_branch_new.gif
      U12_gt_ag_donor_new.gif
      U12_splice_signals.php
      index.php
      ins
      multi_align_nhx.html
    ZSB03PP/
      algnmnts/
      alternativeSplicing/
      data/
      img/
      non_canonical/
      novel/
      ESTclustering.php
      downstreamUTRintrons.php
      extendedCoverage.php
      geneAnnotationVScdna.php
      geneAnnotationVSest.php
      index.php
      miniexons.php
      ncSpliceSites.php
      novelGenes.php
      u12Introns.php
      upstreamUTRintrons.php
      virtualNorthern.php
    index.php
  tmp/
  tutorial/
    CHR5_GSQexample/
    HOWTO/
    lesson/
    GSQ_ATGDB.php
    UCA_ATGDB.php
    index.php
    uca_tutorial.1.gif
    uca_tutorial.2.gif
    uca_tutorial.3.gif
    uca_tutorial.4.gif
  GDBstyle.css
  URIservices.php
  download.php
  index.php
  resource.php
  site_map.php